Stem-loop ipu-mir-9-1

Accession

MI0024660

Description

Ictalurus punctatus ipu-mir-9-1 precursor miRNA

Literature search

1 open access papers mention ipu-mir-9-1
(5 sentences)

Sequence

UCUUUGGUUAUCUAGCUGUAUGAguguuauucauucuucauaaagcuagauaaccgaaagua
..(((((((((((((((.((((((((.....)))...))))).)))))))))))))))....

Structure

--UC               G     ---   u 
    UUUGGUUAUCUAGCU UAUGA   gug u
    ||||||||||||||| |||||   ||| a
    aagccaauagaucga auacu   uac u
auga               a     ucu   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-9

• Accession: MIMAT0029528
• Description: Ictalurus punctatus ipu-miR-9 mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174