Stem-loop ipu-mir-9-5

Accession

MI0024663

Description

Ictalurus punctatus ipu-mir-9-5 precursor miRNA

Literature search

1 open access papers mention ipu-mir-9-5
(5 sentences)

Sequence

UCUUUGGUUAUCUAGCUGUAUGAguauuuugcacuucauaaagcuagauaaccgaaagua
..(((((((((((((((.(((((((.......)).))))).)))))))))))))))....

Structure

--UC               G     -  au 
    UUUGGUUAUCUAGCU UAUGA gu  u
    ||||||||||||||| ||||| ||  u
    aagccaauagaucga auacu ca  u
auga               a     u  cg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-9

• Accession: MIMAT0029528
• Description: Ictalurus punctatus ipu-miR-9 mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174