Stem-loop ipu-mir-7548

Accession

MI0024676

Description

Ictalurus punctatus ipu-mir-7548 precursor miRNA

Sequence

AGCCGCGGCUGUAGGAGCgacugaagaagagggggauggggacaauuguuuuuuguguugcauuccugcaguguguuuga
...((((.((((((((((((((((((((.((..(........)..)).))))))).)))))..)))))))))))).....

Structure

--AGC    G        --     -       g  gg gau 
     CGCG CUGUAGGA  GCgac ugaagaa ag  g   g
     |||| ||||||||  ||||| ||||||| ||  |    
     gugu gacguccu  cguug guuuuuu uu  c   g
aguuu    -        ua     u       g  aa agg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-7548

• Accession: MIMAT0029540
• Description: Ictalurus punctatus ipu-miR-7548 mature miRNA
• Sequence: 1 - AGCCGCGGCUGUAGGAGC - 18
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174