Stem-loop ipu-mir-7550

Accession

MI0024681

Description

Ictalurus punctatus ipu-mir-7550 precursor miRNA

Sequence

AUCCGGCUCGAAGGACCAauuuuguagaggaguuagcugguucuuaggugaauuu
...((.((..(((((((((((((.....)))))....)))))))))).)).....

Structure

--AUC  G  CG        ----     g 
     CG CU  AAGGACCA    auuuu u
     || ||  ||||||||    ||||| a
     gu ga  uucuuggu    ugagg g
uuuaa  g  --        cgau     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-7550

• Accession: MIMAT0029545
• Description: Ictalurus punctatus ipu-miR-7550 mature miRNA
• Sequence: 1 - AUCCGGCUCGAAGGACCA - 18
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174