Stem-loop ipu-mir-7551

Accession

MI0024683

Description

Ictalurus punctatus ipu-mir-7551 precursor miRNA

Sequence

ggacggauggcguaaccguagcaaaacuuaugcguuuucaaacuaaaacgcacuaguguaaacGGGGCCUGAGUCCUUCUGG
((((....(((....((((......(((..((((((((......))))))))..)))....)))).)))...))))......

Structure

------    ggau   guaa    agcaaa   ua        ca 
      ggac    ggc    ccgu      acu  ugcguuuu  a
      ||||    |||    ||||      |||  ||||||||   
      CCUG    CCG    GGca      uga  acgcaaaa  a
GGUCUU    -AGU   ---G    --aaug   uc        uc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-7551

• Accession: MIMAT0029547
• Description: Ictalurus punctatus ipu-miR-7551 mature miRNA
• Sequence: 64 - GGGGCCUGAGUCCUUCUGG - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174