Stem-loop ipu-mir-7553

Accession

MI0024685

Description

Ictalurus punctatus ipu-mir-7553 precursor miRNA

Literature search

1 open access papers mention ipu-mir-7553
(2 sentences)

Sequence

UGACGUCAUUAGCGACCCGACCuauuggauagagacacggccaucgcuucugacgccgcu
...(((((..(((((.(((.(((((...)))).)...)))...)))))..))))).....

Structure

--UGA     UU     --C   --A -    u 
     CGUCA  AGCGA   CCG   C Cuau  
     |||||  |||||   |||   | |||| g
     gcagu  ucgcu   ggc   g gaua  
ucgcc     cu     acc   aca a    g 

Annotation confidence Low

Genome context

Unknown

Mature ipu-miR-7553

• Accession: MIMAT0029549
• Description: Ictalurus punctatus ipu-miR-7553 mature miRNA
• Sequence: 1 - UGACGUCAUUAGCGACCCGACC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174