Stem-loop ipu-mir-7554

Accession

MI0024686

Description

Ictalurus punctatus ipu-mir-7554 precursor miRNA

Sequence

ACAUUUUGUCUAUCUGAAAuacguuacuuguauauuugcguuucguuguacguuucagaugacaaauccacuag
....((((((.((((((((((((..((..(((....)))))..))).....)))))))))))))))........

Structure

----ACAU      U         -----   uu  uu   u 
        UUUGUC AUCUGAAAu     acg  ac  gua a
        |||||| |||||||||     |||  ||  |||  
        aaacag uagacuuug     ugc  ug  cgu u
gaucaccu      -         caugu   uu  --   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-7554

• Accession: MIMAT0029550
• Description: Ictalurus punctatus ipu-miR-7554 mature miRNA
• Sequence: 1 - ACAUUUUGUCUAUCUGAAA - 19
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174