Stem-loop ipu-mir-7563c

Accession

MI0024698

Description

Ictalurus punctatus ipu-mir-7563c precursor miRNA

Sequence

UUUCAGAGCCAGAGAUCGACAGCcuguuccagaucacauggagaucugugaccucgggcucugacgcg
..((((((((.(((.((.((((....(((((.......)))))..)))))).))).))))))))....

Structure

--UU        A   A  G    Ccug     ga 
    UCAGAGCC GAG UC ACAG    uucca  u
    |||||||| ||| || ||||    |||||  c
    agucucgg cuc ag uguc    gaggu  a
gcgc        g   c  -    --ua     ac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-7563c

• Accession: MIMAT0029562
• Description: Ictalurus punctatus ipu-miR-7563c mature miRNA
• Sequence: 1 - UUUCAGAGCCAGAGAUCGACAGC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174