Stem-loop cbr-mir-7588

Accession

MI0024728

Description

Caenorhabditis briggsae cbr-mir-7588 precursor miRNA

Sequence

17716 reads, 2027.0 reads per million, 3 experiments

GUAAGUUGUUGAUUGUGUUUCUUCCcauauucaaaaugaggAAAACCGAUCAAUAAGCUUACAG
(((((((((((((((.((((..((((((.......))).))))))))))))))).)))))))..

Structure

--       -        U    CU   -   au 
  GUAAGUU GUUGAUUG GUUU  UCC cau  u
  ||||||| |||||||| ||||  ||| |||  c
  CAUUCGA UAACUAGC CAAA  Agg gua  a
GA       A        -    --   a   aa 

Annotation confidence High

Genome context

chrX: 13128472-13128535 [+]

Mature cbr-miR-7588-5p

• Accession: MIMAT0053590
• Description: Caenorhabditis briggsae cbr-miR-7588-5p mature miRNA
• Sequence: 1 - GUAAGUUGUUGAUUGUGUUUCUUCC - 25
• Evidence: experimental ; Illumina [1]

Mature cbr-miR-7588-3p

• Accession: MIMAT0029592
• Description: Caenorhabditis briggsae cbr-miR-7588-3p mature miRNA
• Sequence: 42 - AAAACCGAUCAAUAAGCUUACAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508