Stem-loop cbr-mir-247

Accession

MI0024742

Description

Caenorhabditis briggsae cbr-mir-247 precursor miRNA

Sequence

3141 reads, 311.0 reads per million, 3 experiments

AGAGUUCAGACCCUGGUGACCUacagcaguagcaugaggUGACUAGAGUGCUGAGCUCUCC
(((((((((((.(((((.((((.((((....)).)))))).))))).)).)))))))))..

Structure

--         -  C     G    a  -  a 
  AGAGUUCAG AC CUGGU ACCU ca gc g
  ||||||||| || ||||| |||| || ||  
  UCUCGAGUC UG GAUCA Ugga gu cg u
CC         G  A     G    -  a  a 

Annotation confidence High

Genome context

chrX: 10093683-10093743 [+]

Mature cbr-miR-247-5p

• Accession: MIMAT0053594
• Description: Caenorhabditis briggsae cbr-miR-247-5p mature miRNA
• Sequence: 1 - AGAGUUCAGACCCUGGUGACCU - 22
• Evidence: experimental ; Illumina [1]

Mature cbr-miR-247-3p

• Accession: MIMAT0029605
• Description: Caenorhabditis briggsae cbr-miR-247-3p mature miRNA
• Sequence: 40 - UGACUAGAGUGCUGAGCUCUCC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508