miRBase entry: crm-mir-7579

Stem-loop crm-mir-7579

Accession

MI0024747

Description

Caenorhabditis remanei crm-mir-7579 precursor miRNA

Sequence

acggcacucgcaguuuucucaacacucaagacguagcguUGAGGACCUGUAGAGUUCCGUUC
((((.((((((((..((((((((.((........)).)))))))).)))).)))).))))..

Structure

--    c    -    uu        a  caa 
  acgg acuc gcag  uucucaac cu   g
  |||| |||| ||||  |||||||| ||    
  UGCC UGAG UGUC  AGGAGUug ga   a
CU    U    A    -C        c  ugc

Annotation confidence Not enough data

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Genome context

Crem_Contig0: 2909124-2909185 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from crm-mir-7579

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature crm-miR-7579

Accession	MIMAT0029610
Description	Caenorhabditis remanei crm-miR-7579 mature miRNA
Sequence	40 - UGAGGACCUGUAGAGUUCCGUUC - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508