Stem-loop crm-mir-7605

Accession

MI0024761

Description

Caenorhabditis remanei crm-mir-7605 precursor miRNA

Sequence

818 reads, 8.0 reads per million, 9 experiments

AGGUGGAUAGGUUGUGUAGAUUcacggauauuaugauauguaaUCUACCAACUGCUCCAUUCGU
.((((((..(((((.(((((((.(((............)))))))))))))))..))))))...

Structure

--A      UA     U       c   gauau 
   GGUGGA  GGUUG GUAGAUU acg     u
   ||||||  ||||| ||||||| |||      
   UUACCU  UCAAC CAUCUaa ugu     a
UGC      CG     -       -   auagu 

Annotation confidence High

Genome context

Crem_Contig56: 134246-134309 [+]

Mature crm-miR-7605-5p

• Accession: MIMAT0056889
• Description: Caenorhabditis remanei crm-miR-7605-5p mature miRNA
• Sequence: 1 - AGGUGGAUAGGUUGUGUAGAUU - 22
• Evidence: experimental ; Illumina [1]

Mature crm-miR-7605-3p

• Accession: MIMAT0029622
• Description: Caenorhabditis remanei crm-miR-7605-3p mature miRNA
• Sequence: 44 - UCUACCAACUGCUCCAUUCGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508