miRBase entry: crm-mir-7613

Stem-loop crm-mir-7613

Accession

MI0024778

Description

Caenorhabditis remanei crm-mir-7613 precursor miRNA

Sequence

CAUGACACCUACUCGCUCGACGUCGuaucgcugaaacgaccggguggugagguggcauacc
.(((.(((((((.((((((..(((((.((...)).))))))))))))).))))).)))...

Structure

--C   A     -  U      AC     a  g 
   AUG CACCU AC CGCUCG  GUCGu uc  
   ||| ||||| || ||||||  ||||| || c
   uac gugga ug gugggc  cagca ag  
cca   g     g  -      --     a  u

Annotation confidence Not enough data

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Genome context

Crem_Contig41: 71834-71894 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from crm-mir-7613

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature crm-miR-7613

Accession	MIMAT0029639
Description	Caenorhabditis remanei crm-miR-7613 mature miRNA
Sequence	1 - CAUGACACCUACUCGCUCGACGUCG - 25
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508