Stem-loop crm-mir-2254

Accession

MI0024780

Description

Caenorhabditis remanei crm-mir-2254 precursor miRNA

Sequence

agguccuauccuccaguccaaaacuaaucauugagaauuuagUUUGUACUGGGCAUAGGUUACCUCU
(((((((((.(.(((((.((((.((((...........)))))))).)))))).)))))..))))..

Structure

--    --     c u     c    a    ucau 
  aggu  ccuau c ccagu caaa cuaa    u
  ||||  ||||| | ||||| |||| ||||    g
  UCCA  GGAUA G GGUCA GUUU gauu    a
UC    UU     C -     U    -    uaag 

Annotation confidence Not enough data

Genome context

Crem_Contig22: 612520-612586 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from crm-mir-2254

Mature crm-miR-2254

• Accession: MIMAT0029641
• Description: Caenorhabditis remanei crm-miR-2254 mature miRNA
• Sequence: 43 - UUUGUACUGGGCAUAGGUUACCUCU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508