Stem-loop crm-mir-234

Accession

MI0024784

Description

Caenorhabditis remanei crm-mir-234 precursor miRNA

Sequence

91820 reads, 746.0 reads per million, 9 experiments

CGGUAUUCGACGGUGAAUAAUAAaaaugacauugcgacucauucuaUUAUUGCUCGAGAAUACCCUU
.(((((((..(((..(((((((..(((((.........))))).)))))))..))).)))))))...

Structure

--C       GA   UG       Aa     cau 
   GGUAUUC  CGG  AAUAAUA  aauga   u
   |||||||  |||  |||||||  |||||   g
   CCAUAAG  GCU  UUAUUau  uuacu   c
UUC       -A   CG       -c     cag 

Annotation confidence High

Genome context

Crem_Contig218: 7157-7223 [+]

Mature crm-miR-234-5p

• Accession: MIMAT0056905
• Description: Caenorhabditis remanei crm-miR-234-5p mature miRNA
• Sequence: 1 - CGGUAUUCGACGGUGAAUAAUAA - 23
• Evidence: experimental ; Illumina [1]

Mature crm-miR-234-3p

• Accession: MIMAT0029645
• Description: Caenorhabditis remanei crm-miR-234-3p mature miRNA
• Sequence: 47 - UUAUUGCUCGAGAAUACCCUU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508