Stem-loop crm-mir-254

Accession

MI0024785

Description

Caenorhabditis remanei crm-mir-254 precursor miRNA

Sequence

13831 reads, 112.0 reads per million, 9 experiments

UACAGAAGCGUGGAUUUUCACAuaccaaucggaagugucugUGCAAAUCUAUCGCAACUGUACA
(((((..((((((((((.((((.(((........).)).)))).))))))).)))..)))))..

Structure

--     AA   -       U    u  - aau 
  UACAG  GCG UGGAUUU CACA ac c   c
  |||||  ||| ||||||| |||| || |    
  AUGUC  CGC AUCUAAA GUgu ug g   g
AC     AA   U       C    c  u aag 

Annotation confidence High

Genome context

Crem_Contig15: 998484-998547 [-]

Mature crm-miR-254-5p

• Accession: MIMAT0029646
• Description: Caenorhabditis remanei crm-miR-254-5p mature miRNA
• Sequence: 1 - UACAGAAGCGUGGAUUUUCACA - 22
• Evidence: experimental ; Illumina [1]

Mature crm-miR-254-3p

• Accession: MIMAT0056906
• Description: Caenorhabditis remanei crm-miR-254-3p mature miRNA
• Sequence: 42 - UGCAAAUCUAUCGCAACUGUACA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508