miRBase entry: cbn-mir-7621b

Stem-loop cbn-mir-7621b

Accession

MI0024805

Description

Caenorhabditis brenneri cbn-mir-7621b precursor miRNA

Sequence

agcagguuauuacuuuguugaugaguccaaaaauaauguucaUCAACCGGAAUAACACGCUCA
(((..((((((.((..(((((((((.............))))))))).))))))))..)))..

Structure

--   ag      a  uu         uccaa 
  agc  guuauu cu  guugaugag     a
  |||  |||||| ||  |||||||||     a
  UCG  CAAUAA GG  CAACUacuu     a
AC   CA      -  -C         guaau

Annotation confidence Not enough data

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Genome context

Cbre_Contig21: 489597-489659 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-7621b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-7621b

Accession	MIMAT0029661
Description	Caenorhabditis brenneri cbn-miR-7621b mature miRNA
Sequence	43 - UCAACCGGAAUAACACGCUCA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508