miRBase entry: cbn-mir-7624

Stem-loop cbn-mir-7624

Accession

MI0024810

Description

Caenorhabditis brenneri cbn-mir-7624 precursor miRNA

Sequence

agaacacauuuuuuaucccaucuacccgcagaauaaaauggaguAGAGGUGAUUAAAUGUGUUCUGA
(((((((((((...(((((.((((((((..........))).))))))).))).)))))))))))..

Structure

--           uuu   -  a     -   caga 
  agaacacauuu   auc cc ucuac ccg    a
  |||||||||||   ||| || ||||| |||     
  UCUUGUGUAAA   UAG GG AGAug ggu    u
AG           --U   U  -     a   aaaa

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

Cbre_Contig205: 241170-241236 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-7624

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-7624

Accession	MIMAT0029666
Description	Caenorhabditis brenneri cbn-miR-7624 mature miRNA
Sequence	45 - AGAGGUGAUUAAAUGUGUUCUGA - 67
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508