miRBase entry: cbn-mir-7628

Stem-loop cbn-mir-7628

Accession

MI0024814

Description

Caenorhabditis brenneri cbn-mir-7628 precursor miRNA

Sequence

ugaguucggacugaaguauauccauaguuuuugagaUGUACAAUGUCCUAGCUCGAU
((((((.((((....(((((((((.......)).)))))))...)))).))))))..

Structure

--      c    ugaa       -  ua 
  ugaguu ggac    guauauc ca  g
  |||||| ||||    ||||||| ||  u
  GCUCGA CCUG    CAUGUag gu  u
UA      U    -UAA       a  uu

Annotation confidence Not enough data

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Genome context

Cbre_Contig68: 286417-286473 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cbn-mir-7628

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-7628

Accession	MIMAT0029670
Description	Caenorhabditis brenneri cbn-miR-7628 mature miRNA
Sequence	37 - UGUACAAUGUCCUAGCUCGAU - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508