Stem-loop cbn-mir-48-2

Accession

MI0024828

Description

Caenorhabditis brenneri cbn-mir-48-2 precursor miRNA

Sequence

UGAGGUAGGCUCAGUAGAUGCGAacguaaaugagcccacaucggccuuucacauccacuugccuuccucgcc
.((((.((((..(((.((((.(((.(.......(((......)))).))).)))).))).)))).))))...

Structure

--U    U    UC   A    C   c uaaauga   ca 
   GAGG AGGC  AGU GAUG GAa g       gcc  c
   |||| ||||  ||| |||| ||| |       |||   
   cucc uccg  uca cuac cuu c       cgg  a
ccg    u    -u   c    a   u -------   cu 

Annotation confidence Not enough data

Genome context

Cbre_Contig3523: 3778-3849 [-]

Mature cbn-miR-48

• Accession: MIMAT0029683
• Description: Caenorhabditis brenneri cbn-miR-48 mature miRNA
• Sequence: 1 - UGAGGUAGGCUCAGUAGAUGCGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508