Stem-loop cbn-mir-81

Accession

MI0024841

Description

Caenorhabditis brenneri cbn-mir-81 precursor miRNA

Sequence

cgguuuucaccuugaucugagagcuaucugaaugcuaucUGAGAUCAUCGUGAAAGCUAGU
.(((((((((..((((((.(((((.........))..))).))))))..)))))))))...

Structure

--c         cu      g   --  uau 
   gguuuucac  ugaucu aga  gc   c
   |||||||||  |||||| |||  ||   u
   UCGAAAGUG  ACUAGA Ucu  cg   g
UGA         CU      G   au  uaa 

Annotation confidence Not enough data

Genome context

Cbre_Contig0: 979011-979071 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-81

Mature cbn-miR-81

• Accession: MIMAT0029692
• Description: Caenorhabditis brenneri cbn-miR-81 mature miRNA
• Sequence: 40 - UGAGAUCAUCGUGAAAGCUAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508