miRBase entry: cbn-mir-82

Stem-loop cbn-mir-82

Accession

MI0024844

Description

Caenorhabditis brenneri cbn-mir-82 precursor miRNA

Sequence

agguucucacugugaucugcagaguauaaagccuacaucUGAGAUCAUCGUGAAAGCCAGU
.((((.((((.(((((((.(((((((.......))).))))))))))).)))).))))...

Structure

--a    c    u       g    -   ua 
   gguu ucac gugaucu caga gua  a
   |||| |||| ||||||| |||| |||  a
   CCGA AGUG UACUAGA GUcu cau  g
UGA    A    C       -    a   cc

Annotation confidence Not enough data

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Genome context

Cbre_Contig0: 976053-976113 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-82

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-82

Accession	MIMAT0029694
Description	Caenorhabditis brenneri cbn-miR-82 mature miRNA
Sequence	40 - UGAGAUCAUCGUGAAAGCCAGU - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508