miRBase entry: cbn-mir-64m

Stem-loop cbn-mir-64m


Accession
MI0024847
Description
Caenorhabditis brenneri cbn-mir-64m precursor miRNA


Sequence

CAUGACACGUAGUUCGCUGAAAUcuuaccgugcauuucaguuaacacgugucaag
..((((((((.(((.(((((((((.......).)))))))).)))))))))))..

Structure
CA        A   C        - uu 
  UGACACGU GUU GCUGAAAU c  a
  |||||||| ||| |||||||| |  c
  acugugca caa ugacuuua g  c
ga        -   u        c ug 


Annotation confidence Not enough data
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Genome context
Cbre_Contig102: 61078-61132 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cbn-mir-64m
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-64m

Accession MIMAT0029697
Description Caenorhabditis brenneri cbn-miR-64m mature miRNA
Sequence 1 - CAUGACACGUAGUUCGCUGAAAU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508