Stem-loop cbn-mir-64j-1

Accession

MI0024848

Description

Caenorhabditis brenneri cbn-mir-64j-1 precursor miRNA

Sequence

GAUGACACUUGUAUAGUCACGGUUGuucucuaaauuuucaaccugccuaucuugugccauag
.(((.(((..(.((((.((.(((((.............))))))).)))))..))).)))..

Structure

-G   A   UU U    U  C     uucuc 
  AUG CAC  G AUAG CA GGUUG     u
  ||| |||  | |||| || |||||     a
  uac gug  c uauc gu ccaac     a
ga   c   uu -    c  -     uuuua 

Annotation confidence Not enough data

Genome context

Cbre_Contig274: 39823-39884 [-]

Clustered miRNAs

13 other miRNAs are < 10 kb from cbn-mir-64j-1

Mature cbn-miR-64j

• Accession: MIMAT0029698
• Description: Caenorhabditis brenneri cbn-miR-64j mature miRNA
• Sequence: 1 - GAUGACACUUGUAUAGUCACGGUUG - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508