Stem-loop cbn-mir-64f

Accession

MI0024849

Description

Caenorhabditis brenneri cbn-mir-64f precursor miRNA

Sequence

UAUGACACUUAAGCUAAUCUGAAccaauuuagaacuauaggauucaguuuagauaaguggaauagu
(((..((((((..((((.(((((((.((........)).)).))))).)))).))))))..)))..

Structure

--   GA      AG    U     -  a  uua 
  UAU  CACUUA  CUAA CUGAA cc au   g
  |||  ||||||  |||| ||||| || ||    
  aua  gugaau  gauu gacuu gg ua   a
ug   ag      -a    u     a  a  uca 

Annotation confidence Not enough data

Genome context

Cbre_Contig274: 39560-39625 [-]

Clustered miRNAs

13 other miRNAs are < 10 kb from cbn-mir-64f

Mature cbn-miR-64f

• Accession: MIMAT0029699
• Description: Caenorhabditis brenneri cbn-miR-64f mature miRNA
• Sequence: 1 - UAUGACACUUAAGCUAAUCUGAA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508