miRBase entry: cbn-mir-64a-2

Stem-loop cbn-mir-64a-2


Accession
MI0024857
Description
Caenorhabditis brenneri cbn-mir-64a-2 precursor miRNA


Sequence

UAUGACACUUAAGCAUAGGUGGAccauccaagaccaucggcuccagcuaugauaaguggaauagu
(((..((((((..(((((.((((((.............)).)))).))))).))))))..)))..

Structure
--   GA      AG     G    -  aucca 
  UAU  CACUUA  CAUAG UGGA cc     a
  |||  ||||||  ||||| |||| ||     g
  aua  gugaau  guauc accu gg     a
ug   ag      -a     g    c  cuacc 


Annotation confidence Not enough data
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Genome context
Cbre_Contig274: 38399-38463 [-]
Clustered miRNAs
13 other miRNAs are < 10 kb from cbn-mir-64a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbn-miR-64a

Accession MIMAT0029702
Description Caenorhabditis brenneri cbn-miR-64a mature miRNA
Sequence 1 - UAUGACACUUAAGCAUAGGUGGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508