miRBase entry: cbn-mir-64g-2

Stem-loop cbn-mir-64g-2

Accession

MI0024863

Description

Caenorhabditis brenneri cbn-mir-64g-2 precursor miRNA

Sequence

CAUGACACUGAUAAAUAGUUUGAcgcgacaggaaaugaucaaauauuucucggugucaagac
..(((((((((.(((((.(((((((..........)).)))))))))).)))))))))....

Structure

--CA         U     G     -  cgac 
    UGACACUGA AAAUA UUUGA cg    a
    ||||||||| ||||| ||||| ||     
    acuguggcu uuuau aaacu gu    g
caga         c     -     a  aaag

Annotation confidence Not enough data

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Genome context

Cbre_Contig274: 38025-38086 [-]

Clustered miRNAs

13 other miRNAs are < 10 kb from cbn-mir-64g-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-64g

Accession	MIMAT0029707
Description	Caenorhabditis brenneri cbn-miR-64g mature miRNA
Sequence	1 - CAUGACACUGAUAAAUAGUUUGA - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508