miRBase entry: cbn-mir-64a-4

Stem-loop cbn-mir-64a-4

Accession

MI0024867

Description

Caenorhabditis brenneri cbn-mir-64a-4 precursor miRNA

Sequence

UAUGACACUUAAGCAUAGGUGGAccaucgaagaucauaggcuccagcuaugauaaguggaauagu
(((..((((((..(((((.((((((.............)).)))).))))).))))))..)))..

Structure

--   GA      AG     G    -  aucga 
  UAU  CACUUA  CAUAG UGGA cc     a
  |||  ||||||  ||||| |||| ||     g
  aua  gugaau  guauc accu gg     a
ug   ag      -a     g    c  auacu

Annotation confidence Not enough data

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Genome context

Cbre_Contig230: 84290-84354 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from cbn-mir-64a-4

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-64a

Accession	MIMAT0029702
Description	Caenorhabditis brenneri cbn-miR-64a mature miRNA
Sequence	1 - UAUGACACUUAAGCAUAGGUGGA - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508