miRBase entry: cbn-mir-44-3

Stem-loop cbn-mir-44-3

Accession

MI0024876

Description

Caenorhabditis brenneri cbn-mir-44-3 precursor miRNA

Sequence

cuggaugugcucguuagucauagacgauacacagagaacggucauaUGACUAGAGACACAUUCAGCU
(((((((((.((.((((((((((((...............))).))))))))).)))))))))))..

Structure

--         c  g         -   gauaca 
  cuggaugug uc uuagucaua gac      c
  ||||||||| || ||||||||| |||      a
  GACUUACAC AG GAUCAGUau cug      g
UC         -  A         a   gcaaga

Annotation confidence Not enough data

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Genome context

Cbre_Contig900: 5965-6031 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-44-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-44

Accession	MIMAT0029711
Description	Caenorhabditis brenneri cbn-miR-44 mature miRNA
Sequence	47 - UGACUAGAGACACAUUCAGCU - 67
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508