miRBase entry: cbn-mir-61-1

Stem-loop cbn-mir-61-1

Accession

MI0024877

Description

Caenorhabditis brenneri cbn-mir-61-1 precursor miRNA

Sequence

ugggucacggugcuuaguccuuccaacagucgguaaUGACUAGAACCGUGACUCAGC
(((((((((((..((((((.((((.......)).)).)))))).)))))))))))..

Structure

--           gc      c  -  aa 
  ugggucacggu  uuaguc uu cc  c
  |||||||||||  |||||| || ||  a
  ACUCAGUGCCA  GAUCAG aa gg  g
CG           -A      U  u  cu

Annotation confidence Not enough data

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Genome context

Cbre_Contig1461: 4034-4090 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-61-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-61

Accession	MIMAT0029712
Description	Caenorhabditis brenneri cbn-miR-61 mature miRNA
Sequence	37 - UGACUAGAACCGUGACUCAGC - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508