miRBase entry: cbn-mir-72a

Stem-loop cbn-mir-72a


Accession
MI0024880
Description
Caenorhabditis brenneri cbn-mir-72a precursor miRNA


Sequence

UGGCAAGAUGUUGGCAUAGCUGAaguauccacuagaaaucagcucugcuacauacugccgug
.((((..((((.((((.(((((((((....))).....)))))).))))))))..))))...

Structure
--U    AG    U    U      -----   a 
   GGCA  AUGU GGCA AGCUGA     agu u
   ||||  |||| |||| ||||||     |||  
   ccgu  uaca ucgu ucgacu     uca c
gug    ca    -    c      aaaga   c 


Annotation confidence Not enough data
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Genome context
Cbre_Contig105: 252854-252915 [+]

Database links

Mature cbn-miR-72a

Accession MIMAT0029714
Description Caenorhabditis brenneri cbn-miR-72a mature miRNA
Sequence 1 - UGGCAAGAUGUUGGCAUAGCUGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508