Stem-loop cbn-mir-239b

Accession

MI0024898

Description

Caenorhabditis brenneri cbn-mir-239b precursor miRNA

Sequence

UUUGUACUUCACAAGAGUACUGgcgguucagguccggcucagaacuuuuguggggugcaaga
((((((((((((((((((.(((((((.......)).)).))).)))))))))))))))))).

Structure

-                  A   -  -  uu 
 UUUGUACUUCACAAGAGU CUG gc gg  c
 |||||||||||||||||| ||| || ||  a
 gaacgugggguguuuuca gac cg cc  g
a                  a   u  g  ug 

Annotation confidence Not enough data

Genome context

Cbre_Contig21: 126207-126268 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-239b

Mature cbn-miR-239b

• Accession: MIMAT0029727
• Description: Caenorhabditis brenneri cbn-miR-239b mature miRNA
• Sequence: 1 - UUUGUACUUCACAAGAGUACUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508