Stem-loop cbn-mir-239a

Accession

MI0024899

Description

Caenorhabditis brenneri cbn-mir-239a precursor miRNA

Sequence

UUUGUACUACACAUAGGUACUGGaaaacuuaccacagauuauccagugcuuggucuagugcaaga
(((((((((.((.(((((((((((.((((......)).)).))))))))))))).))))))))).

Structure

-         C  A           a  -  ua 
 UUUGUACUA AC UAGGUACUGGa aa cu  c
 ||||||||| || ||||||||||| || ||   
 gaacgugau ug guucgugaccu uu ga  c
a         c  -           a  a  ca 

Annotation confidence Not enough data

Genome context

Cbre_Contig21: 125163-125227 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-239a

Mature cbn-miR-239a

• Accession: MIMAT0029728
• Description: Caenorhabditis brenneri cbn-miR-239a mature miRNA
• Sequence: 1 - UUUGUACUACACAUAGGUACUGG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508