Stem-loop cbn-lin-4-1

Accession

MI0024907

Description

Caenorhabditis brenneri cbn-lin-4-1 precursor miRNA

Sequence

UCCCUGAGACCUCAAGUGUGAgcguacuguagaugcuucacaccugggcucucuggguacc
.(((.((((.((((.((((((((((.......)))).)))))).)))).)))).)))....

Structure

---U   U    C    A      -    ac 
    CCC GAGA CUCA GUGUGA gcgu  u
    ||| |||| |||| |||||| ||||  g
    ggg cucu gggu cacacu cgua  u
ccau   u    c    c      u    ga 

Annotation confidence Not enough data

Genome context

Cbre_Contig36: 499331-499391 [+]

Mature cbn-lin-4

• Accession: MIMAT0029734
• Description: Caenorhabditis brenneri cbn-lin-4 mature miRNA
• Sequence: 1 - UCCCUGAGACCUCAAGUGUGA - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508