miRBase entry: cbn-mir-7638

Stem-loop cbn-mir-7638

Accession

MI0024913

Description

Caenorhabditis brenneri cbn-mir-7638 precursor miRNA

Sequence

aaggagcuauucgcgaccacucaugauucaugaaaaugaagUGGCAGUGGAUAGCUCCUUUGA
((((((((((((((..((((((((...........))).)))))..))))))))))))))...

Structure

---              ga     -   gauu 
   aaggagcuauucgc  ccacu cau    c
   ||||||||||||||  ||||| |||    a
   UUCCUCGAUAGGUG  GGUga gua    u
AGU              AC     a   aaag

Annotation confidence Not enough data

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Genome context

Cbre_Contig205: 203997-204059 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cbn-mir-7638

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-7638

Accession	MIMAT0029738
Description	Caenorhabditis brenneri cbn-miR-7638 mature miRNA
Sequence	42 - UGGCAGUGGAUAGCUCCUUUGA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508