Stem-loop cbn-mir-47

Accession

MI0024922

Description

Caenorhabditis brenneri cbn-mir-47 precursor miRNA

Sequence

aagggagcuuucuggugacaguucgauuuugaacucuuacUGUCAUGGAGGCGCUCUCUUCA
((((((((((((..((((((((..((........))..)))))))).)))).))))))))..

Structure

--        -    ug        uc  uuu 
  aagggagc uuuc  gugacagu  ga   u
  |||||||| ||||  ||||||||  ||    
  UUCUCUCG GGAG  UACUGUca  cu   g
AC        C    -G        uu  caa 

Annotation confidence Not enough data

Genome context

Cbre_Contig42: 326154-326215 [+]

Mature cbn-miR-47

• Accession: MIMAT0029744
• Description: Caenorhabditis brenneri cbn-miR-47 mature miRNA
• Sequence: 41 - UGUCAUGGAGGCGCUCUCUUCA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508