Stem-loop cbn-mir-790-1

Accession

MI0024929

Description

Caenorhabditis brenneri cbn-mir-790-1 precursor miRNA

Sequence

CUUGGCACUCGCGAACACCGCGAucuaacuguauaaaucgcggcguuagcucguggcaaaca
.(((.(((..((.(((.(((((((.((......)).))))))).))).))..))).)))...

Structure

--C   G   UC  G   A       c  ac 
   UUG CAC  GC AAC CCGCGAu ua  u
   ||| |||  || ||| ||||||| ||   
   aac gug  cg uug ggcgcua au  g
aca   g   cu  a   c       a  au 

Annotation confidence Not enough data

Genome context

Cbre_Contig521: 36581-36642 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cbn-mir-790-1

Mature cbn-miR-790

• Accession: MIMAT0029749
• Description: Caenorhabditis brenneri cbn-miR-790 mature miRNA
• Sequence: 1 - CUUGGCACUCGCGAACACCGCGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508