Stem-loop cbn-mir-85

Accession

MI0024972

Description

Caenorhabditis brenneri cbn-mir-85 precursor miRNA

Sequence

ccgacuuuucaauauuuugaaaccaguuauucugagaaugguUACAAAGUAUUUGAAAAGCCGUGC
.((.(((((((((((((((.(((((.............))))).))))))).)))))))).))...

Structure

--c  a        -       a     guuau 
   cg cuuuucaa uauuuug aacca     u
   || |||||||| ||||||| |||||     c
   GC GAAAAGUU AUGAAAC Uuggu     u
CGU  C        U       A     aagag 

Annotation confidence Not enough data

Genome context

Cbre_Contig90: 27640-27705 [+]

Mature cbn-miR-85

• Accession: MIMAT0029780
• Description: Caenorhabditis brenneri cbn-miR-85 mature miRNA
• Sequence: 43 - UACAAAGUAUUUGAAAAGCCGUGC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508