Stem-loop sci-mir-7642

Accession

MI0024978

Description

Sycon ciliatum sci-mir-7642 precursor miRNA

Sequence

cccccgacuguaUCUUGUUACGGUACGUCUUCccaugguuacuucggUGGACGUGCCGUCACAAGAUGCagugcaaug
......((((((((((((.(((((((((((.((...(....)...)).))))))))))).))))))))))))......

Structure

cccccg            U           U  cau g 
      acuguaUCUUGU ACGGUACGUCU Cc   g u
      |||||||||||| ||||||||||| ||   |  
      ugaCGUAGAACA UGCCGUGCAGG gg   c u
guaacg            C           U  cuu a 

Annotation confidence Low

Genome context

Unknown

Mature sci-miR-7642-5p

• Accession: MIMAT0029783
• Description: Sycon ciliatum sci-miR-7642-5p mature miRNA
• Sequence: 13 - UCUUGUUACGGUACGUCUUC - 32
• Evidence: experimental ; Illumina [1]

Mature sci-miR-7642-3p

• Accession: MIMAT0029784
• Description: Sycon ciliatum sci-miR-7642-3p mature miRNA
• Sequence: 48 - UGGACGUGCCGUCACAAGAUGC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23349041
   The identification of microRNAs in calcisponges: independent evolution of microRNAs in basal metazoans
   "Robinson JM, Sperling EA, Bergum B, Adamski M, Nichols SA, Adamska M, Peterson KJ"
   "J Exp Zool B Mol Dev Evol (2013) 320:84-93