miRBase entry: crm-mir-35h

Stem-loop crm-mir-35h

Accession

MI0025052

Description

Caenorhabditis remanei crm-mir-35h precursor miRNA

Sequence

ugcugguuucgacuucgguaauaggucaaaauauaaaaaauaccuaUCACCGGGUGGAAACUGGUGCG
.(((((((((.(((.((((.((((((...............)))))).))))))).)))))))))...

Structure

--u         g   u    a      caaaau 
   gcugguuuc acu cggu auaggu      a
   ||||||||| ||| |||| ||||||      u
   UGGUCAAAG UGG GCCA Uaucca      a
GCG         G   -    C      uaaaaa

Annotation confidence Not enough data

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Genome context

Crem_Contig93: 221885-221952 [-]

Clustered miRNAs

15 other miRNAs are < 10 kb from crm-mir-35h

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature crm-miR-35h

Accession	MIMAT0029920
Description	Caenorhabditis remanei crm-miR-35h mature miRNA
Sequence	47 - UCACCGGGUGGAAACUGGUGCG - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508