miRBase entry: cbn-mir-35g

Stem-loop cbn-mir-35g

Accession

MI0025066

Description

Caenorhabditis brenneri cbn-mir-35g precursor miRNA

Sequence

agcugguuucuccucuggugauaaauccagcagugcuuaUCACCGGGAGUAAAUCUGCUCG
(((.((((((((((..((((((((...((....)).))))))))))))).))))).)))..

Structure

--   u     -     cu        auc  g 
  agc gguuu cuccu  ggugauaa   ca c
  ||| ||||| |||||  ||||||||   ||  
  UCG CUAAA GAGGG  CCACUauu   gu a
GC   U     U     --        --c  g

Annotation confidence Not enough data

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Genome context

Cbre_Contig34: 782645-782705 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35g

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-35g

Accession	MIMAT0029934
Description	Caenorhabditis brenneri cbn-miR-35g mature miRNA
Sequence	40 - UCACCGGGAGUAAAUCUGCUCG - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508