Stem-loop cbn-mir-35i

Accession

MI0025068

Description

Caenorhabditis brenneri cbn-mir-35i precursor miRNA

Sequence

ugcugguuucuaccgcggugauauuucugaguuguaacuaUCACCGGGUAAAAAUUUGGCAC
(((((((((.((((.((((((((.(((......).)).)))))))))))).))).)))))).

Structure

-      -   c    g        u  - ug 
 ugcugg uuu uacc cggugaua uu c  a
 |||||| ||| |||| |||||||| || |   
 ACGGUU AAA AUGG GCCACUau aa g  g
C      U   A    -        c  u uu 

Annotation confidence Not enough data

Genome context

Cbre_Contig34: 783546-783607 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35i

Mature cbn-miR-35i

• Accession: MIMAT0029936
• Description: Caenorhabditis brenneri cbn-miR-35i mature miRNA
• Sequence: 41 - UCACCGGGUAAAAAUUUGGCAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508