miRBase entry: cbn-mir-35b-2

Stem-loop cbn-mir-35b-2

Accession

MI0025069

Description

Caenorhabditis brenneri cbn-mir-35b-2 precursor miRNA

Sequence

agcugauuucucuacaggugauaauuccaucgaguguuuaUCACCGGGAGUAAAUCUGCUCU
(((.(((((((((...(((((((((((....))))...))))))).)))).))))).)))..

Structure

--   u     -    aca       ---    c 
  agc gauuu cucu   ggugaua   auuc a
  ||| ||||| ||||   |||||||   ||||  
  UCG CUAAA GAGG   CCACUau   ugag u
UC   U     U    --G       uug    c

Annotation confidence Not enough data

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Genome context

Cbre_Contig34: 783694-783755 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-35b

Accession	MIMAT0029929
Description	Caenorhabditis brenneri cbn-miR-35b mature miRNA
Sequence	41 - UCACCGGGAGUAAAUCUGCUCU - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508