Stem-loop cbn-mir-35b-3

Accession

MI0025074

Description

Caenorhabditis brenneri cbn-mir-35b-3 precursor miRNA

Sequence

agcugauuucuccacuggugauaauuccaagaauaguguuuaUCACCGGGAGUAAAUCUGCUCU
(((.(((((((((.(.((((((((...............))))))))))))).))))).)))..

Structure

--   u     -    a u        uuccaa 
  agc gauuu cucc c ggugauaa      g
  ||| ||||| |||| | ||||||||      a
  UCG CUAAA GAGG G CCACUauu      a
UC   U     U    - -        ugugau 

Annotation confidence Not enough data

Genome context

Cbre_Contig34: 784736-784799 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from cbn-mir-35b-3

Mature cbn-miR-35b

• Accession: MIMAT0029929
• Description: Caenorhabditis brenneri cbn-miR-35b mature miRNA
• Sequence: 43 - UCACCGGGAGUAAAUCUGCUCU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508