Stem-loop bta-mir-2285af-1

Accession

MI0025186

Description

Bos taurus bta-mir-2285af-1 precursor miRNA

Literature search

11 open access papers mention bta-mir-2285af-1
(15 sentences)

Sequence

19585 reads, 8.0 reads per million, 254 experiments

uauguauuggguugGCCAAAAAGCUUGUUCAGGUUUuuacaugauguuaaggaaAAACUCAAACAAACUUUUggaccaauccaacaug
(((((..((((((((((((((.(.(((((..((((((..(..........)..))))))..))))).))))))).)))))))))))))

Structure

     au        -      A C     CA      ua auga 
uaugu  uggguugG CCAAAA G UUGUU  GGUUUu  c    u
|||||  |||||||| |||||| | |||||  ||||||  |     
guaca  accuaacc ggUUUU C AACAA  UCAAAa  g    g
     --        a      - A     AC      ag aauu 

Annotation confidence Medium

Genome context

11: 77398097-77398184 [+]

Mature bta-miR-2285af-5p

• Accession: MIMAT0031057
• Description: Bos taurus bta-miR-2285af-5p mature miRNA
• Sequence: 15 - GCCAAAAAGCUUGUUCAGGUUU - 36
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285af-1-3p

• Accession: MIMAT0051038
• Description: Bos taurus bta-miR-2285af-1-3p mature miRNA
• Sequence: 55 - AAACUCAAACAAACUUUU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103