Stem-loop bta-mir-2285x

Accession

MI0025190

Description

Bos taurus bta-mir-2285x precursor miRNA

Literature search

11 open access papers mention bta-mir-2285x
(15 sentences)

Sequence

18614 reads, 6.0 reads per million, 294 experiments

uauauuggguugGCCAAAAAGUUUGUUCAGgguuuuucuaagauguuacggaAAAAUCUGAAUGAACUUUUGGccaaccuaauaua
(((((((((((((((((((.(((((((((((.(((((((((....))).)))))).))))))))))))))))))))))))))))))

Structure

                   A           g      -   g 
uauauuggguugGCCAAAA GUUUGUUCAGg uuuuuc uaa a
||||||||||||||||||| ||||||||||| |||||| |||  
auauaauccaaccGGUUUU CAAGUAAGUCU AAAagg auu u
                   -           A      c   g 

Annotation confidence Medium

Genome context

16: 59594596-59594681 [+]

Mature bta-miR-2285x-5p

• Accession: MIMAT0051041
• Description: Bos taurus bta-miR-2285x-5p mature miRNA
• Sequence: 13 - GCCAAAAAGUUUGUUCAG - 30
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285x-3p

• Accession: MIMAT0029946
• Description: Bos taurus bta-miR-2285x-3p mature miRNA
• Sequence: 53 - AAAAUCUGAAUGAACUUUUGG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103