miRBase entry: bta-mir-6529b

Stem-loop bta-mir-6529b

Accession

MI0025191

Description

Bos taurus bta-mir-6529b precursor miRNA

Literature search

1 open access papers mention bta-mir-6529b
(1 sentences)

Sequence

10098 reads, 0 reads per million, 69 experiments

gaaaccgugcgcucuuaaagagguaaaaggcacaggcuucauugacauugacgcACUCUGCGCCUCUGAUCUCUcaagagaacagguuuu
((((((.((..(((((..((((((...((((.(((((.(((.......))).))...))).))))...)))))).)))))..))))))))

Structure

      g  cg     aa      aaa    a   ---  u   uu 
gaaacc ug  cucuu  agaggu   aggc cag   gc uca  g
|||||| ||  |||||  ||||||   |||| |||   || |||  a
uuuugg ac  gagaa  UCUCUA   UCCG GUC   cg agu  c
      -  aa     -c      GUC    C   UCA  c   ua

Annotation confidence Not enough data

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Genome context

chr1: 65675391-65675480 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-6529b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bta-miR-6529b

Accession	MIMAT0029947
Description	Bos taurus bta-miR-6529b mature miRNA
Sequence	55 - ACUCUGCGCCUCUGAUCUCU - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 23100578
Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
"Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
"J Anim Sci (2013) 91:90-103