Stem-loop bta-mir-6529b

Accession

MI0025191

Description

Bos taurus bta-mir-6529b precursor miRNA

Literature search

1 open access papers mention bta-mir-6529b
(1 sentences)

Sequence

29149 reads, 39.0 reads per million, 97 experiments

gaaaccgugcgcucuuAAAGAGGUAAAAGGCACAGGcuucauugacauugacgcACUCUGCGCCUCUGAUCUCUCaagagaacagguuuu
((((((.((..(((((..((((((...((((.(((((.(((.......))).))...))).))))...)))))).)))))..))))))))

Structure

      g  cg     AA      AAA    A   ---  u   uu 
gaaacc ug  cucuu  AGAGGU   AGGC CAG   Gc uca  g
|||||| ||  |||||  ||||||   |||| |||   || |||  a
uuuugg ac  gagaa  UCUCUA   UCCG GUC   cg agu  c
      -  aa     -C      GUC    C   UCA  c   ua 

Annotation confidence Medium

Genome context

1: 64851598-64851687 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-6529b

Mature bta-miR-6529b-5p

• Accession: MIMAT0051042
• Description: Bos taurus bta-miR-6529b-5p mature miRNA
• Sequence: 17 - AAAGAGGUAAAAGGCACAGG - 36
• Evidence: experimental ; Illumina [1]

Mature bta-miR-6529b-3p

• Accession: MIMAT0029947
• Description: Bos taurus bta-miR-6529b-3p mature miRNA
• Sequence: 55 - ACUCUGCGCCUCUGAUCUCUC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103