Stem-loop bta-mir-2285z

Accession

MI0025194

Description

Bos taurus bta-mir-2285z precursor miRNA

Literature search

11 open access papers mention bta-mir-2285z
(15 sentences)

Sequence

641189 reads, 170.0 reads per million, 320 experiments

uaauuuaaaauguguuggCCAGAAAGUUCAUUCAGGUCCUucccuaacaucuuacagAAAACCUGAAUGAACUUUUUGGccaacaacauuuaauug
.......((((((((((((((((((((((((((((((..(((..(((....)))..))).)))))))))))))))))))))))).)))))).....

Structure

uaauuua      -                        CC   cc   c 
       aaaugu guuggCCAGAAAGUUCAUUCAGGU  Uuc  uaa a
       |||||| ||||||||||||||||||||||||  |||  |||  
       uuuaca caaccGGUUUUUCAAGUAAGUCCA  AAg  auu u
--guuaa      a                        -A   ac   c 

Annotation confidence Medium

Genome context

20: 13456011-13456106 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285z

Mature bta-miR-2285z-5p

• Accession: MIMAT0029950
• Description: Bos taurus bta-miR-2285z-5p mature miRNA
• Sequence: 19 - CCAGAAAGUUCAUUCAGGUCCU - 40
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285z-3p

• Accession: MIMAT0051044
• Description: Bos taurus bta-miR-2285z-3p mature miRNA
• Sequence: 58 - AAAACCUGAAUGAACUUUUUGG - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103