Dead hairpin entry

Stem-loop osa-MIR7692

Accession

MI0025199

Description

Oryza sativa osa-MIR7692 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Sequence

41533 reads, 165.0 reads per million, 142 experiments

cguccaaacaaguccuccaaauuaauuauuuggguuaauauaguucuuggauccaaaaaagugccacgugagcaugccaagucauccucacAUGCAGCGGUAUGAAUGAAAUGACcauucuacccuuauauaccaccuagaaaagaaagaaaaaaaagaagauaaauguuuucacacguguauguucguuuuagaauugucacuuacgauuguugcuggccuguuauuuuuuucuguuuguguuuuuucuuucuuuuuuauaugguauauaaagguagaauggucauuucauucauaccgcuacaugcgaggaugacuuggcaugcuuacguggcacuuuuugugggucuAAGGACUAUAUUAACCCAaaugauuaauuuggaugacuuguuuggucg
((.(((((((((((.((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((.((((.(((((((((((((((((((((((((((((.((((((((((..((((((((((((((((((..((((((....))))))....(((...((((......))))...))).(((((............................)))))))))))))))))))))))..)))))))))).))))))))))))))))))))))))))))).)))).)))))))))))))))))))))))))))))))))).)))))))))))))))))))))))))))))))))))))))).))))))))))).))

Structure

  u           c                                        -                                  a    C                             c          cc                  -----------------aagaagauaaauguuuucacac   uau    gu 
cg ccaaacaaguc uccaaauuaauuauuuggguuaauauaguucuuggaucca aaaaagugccacgugagcaugccaagucauccuc cAUG AGCGGUAUGAAUGAAAUGACcauucuacc uuauauacca  uagaaaagaaagaaaaaa                                       gug   guuc  u
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||                                       |||   ||||   
gc gguuuguucag agguuuaauuaguaaACCCAAUUAUAUCAGGAAucugggu uuuuucacggugcauucguacgguucaguaggag guac ucgccauacuuacuuuacugguaagaugg aauauauggu  auuuuuucuuucuuuuuu                                       cac   uaag  u
  u           u                                        g                                  c    a                             a          au                  guguuugucuuuuuuuauuguccggucguuguuagcauu   ugu    au