Dead hairpin entry

Stem-loop osa-MIR7695

Accession

MI0025202

Description

Oryza sativa osa-MIR7695 precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

6 open access papers mention osa-MIR7695
(19 sentences)

Sequence

310297 reads, 1630.0 reads per million, 142 experiments

gaguaaaaugcacuagcgguccuuaaacuuaucgggagguuucacuuaaguccacgaacuugcaaagcgcacaucgaggucucuaaacuugguuuAUUGUAUCAUCCCGGUCCAAAgccacguuugauuguggucuugccuauguggcacgccacgugaaugaugacauggaauuuuuuuuauuuuuuucucccuucuuccuucuuuuuucaccacugcgacaaccccuccccucguuccgccucucaccaccgagaaaaaagaaggaagaaagagaaaaaaagaaggaagaagggagaaaaaaauaaaaaaaauuccaugucauuauccacgugaugugccacguaggcaagaccacagucaaaugcggcuuugaaccggaaugauauaauaaaccaaguuuagggaucucgaugugcacuuugcaaguucguggaucuAAGUGAAACCUCCUGACAAGUUUAagaaccgcugguguauuuuacuc
((((((((((((((((((((.(((((((((.(((((((((((((((((.((((((((((((((((((.(((((((((((((((((((((((((((((((((((((.(((((.(((((((.(((((((((((((((((((((((((((((((.((((((.(((((((((((((((((((((((((((((((((((((((((((((((((((.................(((.(.((.(((....((((......)))).....))).)).)...))).))))))))))))))))))))))))))))))))))))))))))))))))))).)))))).))))))))))))))))))))))))))))))).))))))).))))).))))))))))))))))))))))))))))))))))))).)))))))))))))))))).))))))))))))))))).))))))))).))))))))))))))))))))

Structure

                    c         a                 a                  c                                     C     C       a                               c      a                                                   caccacugcgacaaccc   --c c  g   -cgcc    ac 
gaguaaaaugcacuagcggu cuuaaacuu ucgggagguuucacuua guccacgaacuugcaaag gcacaucgaggucucuaaacuugguuuAUUGUAUCAU CCGGU CAAAgcc cguuugauuguggucuugccuauguggcacg cacgug augaugacauggaauuuuuuuuauuuuuuucucccuucuuccuucuuuuuu                 cuc   c uc uuc     ucuc  c
|||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||                 |||   | || |||     ||||   
cucauuuuauguggucgcca gaAUUUGAA AGUCCUCCAAAGUGAAu uaggugcuugaacguuuc cguguagcucuagggauuugaaccaaauaauauagua ggcca guuucgg guaaacugacaccagaacggaugcaccgugu gugcac uauuacuguaccuuaaaaaaaauaaaaaaagagggaagaaggaagaaaaaa                 gag   g ag aag     agag  a
                    a         C                 c                  a                                     a     a       c                               a      c                                                   ----------------a   aaa a  g   aaaaa    cc